Colleges
Main funding sources
Wellcome Trust
Medical Research Council (MRC UK)
Saad Jbabdi
Professor of Biomedical Engineering
- Wellcome Trust Senior Research Fellow
- Associate Director, Oxford Centre for Integrative Neuroimaging (OxCIN)
- Lecturer in Engineering and Senior Research Fellow, St Hilda's College
 | I and my co-authors, William Clarke and Adam Berrington published a guide to running an MRS study, including acquisition, processing and analysis of the data. You can buy a physical or ebook now from OUP or Amazon. |
My group develops computational methods for enabling neuroimaging research. We create methods in diffusion MRI to study brain tissue microstructure and connectivity, in functional MRI to study brain activity and individual variation in brain function; and in MR spectroscopy to study brain metabolites and their changes under various experimental conditions. We also do research across scales, combining MRI and microscopy to better understand the biological processes underpinning MRI signals, and research across- species to understand commonalities and differences between human and non-human primate brains.
Recent publications
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The relationship between visual acuity loss and GABAergic inhibition in amblyopia
Journal article
Ip IB. et al, (2024), Imaging Neuroscience, 2, 1 - 18
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GABA and Glutamate in hMT+ Link to Individual Differences in Residual Visual Function After Occipital Stroke.
Journal article
Willis HE. et al, (2023), Stroke, 54, 2286 - 2295
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Tensor image registration library: Deformable registration of stand-alone histology images to whole-brain post-mortem MRI data.
Journal article
Huszar IN. et al, (2023), Neuroimage, 265
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Clinical applications of magnetic resonance imaging based functional and structural connectivity.
Journal article
Wu C. et al, (2021), Neuroimage, 244
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Modelling white matter in gyral blades as a continuous vector field.
Journal article
Cottaar M. et al, (2020), Neuroimage, 227
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FSL-MRS: An end-to-end spectroscopy analysis package.
Journal article
Clarke WT. et al, (2020), Magn Reson Med
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FSL‐MRS: An end‐to‐end spectroscopy analysis package
Journal article
Clarke WT. et al, (2020), Magnetic Resonance in Medicine
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Challenges and future directions for representations of functional brain organization.
Other
Bijsterbosch J. et al, (2020), Nat Neurosci, 23, 1484 - 1495
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Use of multi-flip angle measurements to account for transmit inhomogeneity and non-Gaussian diffusion in DW-SSFP.
Journal article
Tendler BC. et al, (2020), Neuroimage, 220
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Non-Negative Data-Driven Mapping of Structural Connections with Application to the Neonatal Brain.
Journal article
Thompson E. et al, (2020), Neuroimage