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Auto-queued FSL software

Which tools automatically submit themselves to a cluster queue

Which tools automatically use a cluster? 

The following programs/scripts are able to self-submit in a HPC cluster and should not be used in conjunction with fsl_sub. 

Scripts that self-submit
FDT

bedpostx
FEAT
  • feat
  • feat_gm_prepare
FIRST
  • run_first_all
FSLVBM
  • fslvbm_2_template
  • fslvbm_3_proc
POSSUM
  • possumX
RANDOMISE
  • randomise_parallel
TBSS
  • tbss_2_reg
GUIs that self-submit
FDT
  • FDT GUI ( probtrackx only )
FEAT
  • FEAT GUI
FLIRT
  • FLIRT GUI
POSSUM
  • POSSUM GUI

Note that all other FSL GUIs will only run jobs on the local machine, to submit to a cluster you must use the equivalent command-line call in conjunction with fsl_sub.