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SMB (Windows file sharing)
How to access FMRIB file servers over SMB
fsl_sub Environment variables
Environment variables that can be set to control fsl_sub submitted tasks
Configuring fsl_sub
How to change fsl_sub's configuration for all jobs you run
MATLAB Tasks
How to submit non-interactive MATLAB scripts to the queues
Multi-Threaded Software
How to request a multi-threaded slot and how to ensure your software only uses the CPU cores it has been allocated
GPU Tasks
How to request a GPU for your job
Array Jobs
How to submit independent 'clone' tasks for running in parallel
Advanced Usage
More advanced techniques for submitting jobs, e.g. GPU, array and MATLAB tasks and full fsl_sub usage information
Monitoring Tasks
How to monitor the progress of your submitted job
Troubleshooting
How to troubleshoot failed jobs
Partitions
Available SLURM partitions
Compute Cluster
Submitting jobs to the compute cluster
Getting Started
Initial setup of your account
The BMRC Compute Cluster
Information on compute facilities hosted by BioMedical Research Computing (BMRC)
Submitting A Job
Submitting a job to the FMRIB cluster